ncRNA ID | novel_gma_miR4279 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:20927629-20927699 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045230;SRR1295522 |
Length | 24 |
Mature sequence(if miRNA) | 48 - ACCACCGUCGUCGCCACCAACAUG - 71 |
Stem-loop(if miRNA) |
--                         ---   U AC   ACCACCGUCGUCGCCACCAACAUGA   CCG C  U   |||||||||||||||||||||||||   ||| |   UGGUGGUAGCAGUGGUGGUUGUACU   GGU G  G AU                         AUU   C CC |
Stem-loop sequence | ACCACCGUCGUCGCCACCAACAUGACCGUCACUGCCGCUGGUUAUCAUGUUGGUGGUGACGAUGGUGGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531742.3 |
|
1.5 | PREDICTED: Glycine max vacuolar protein sorting-associated protein 36 (LOC100783044), mRNA | vacuolar protein sorting-associated protein 36(LOC100783044) | coding protein | psRNATarget | |||||||||
XM_014761633.1 |
|
1.5 | PREDICTED: Glycine max glycine-rich protein HC1-like (LOC106794371), mRNA | glycine-rich protein HC1-like(LOC106794371) | coding protein | psRNATarget |