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BaseInfo

ncRNA ID novel_gma_miR4279
Species Glycine max
Class miRNA
Genome position Chr18:20927629-20927699 [-]
Reference genome Glycine_max_v2.0
Source SRR2045230;SRR1295522
Length 24
Mature sequence(if miRNA) 48 - ACCACCGUCGUCGCCACCAACAUG - 71
Stem-loop(if miRNA) --                         ---   U AC
  ACCACCGUCGUCGCCACCAACAUGA   CCG C  U
  |||||||||||||||||||||||||   ||| |
  UGGUGGUAGCAGUGGUGGUUGUACU   GGU G  G
AU                         AUU   C CC
Stem-loop sequence ACCACCGUCGUCGCCACCAACAUGACCGUCACUGCCGCUGGUUAUCAUGUUGGUGGUGACGAUGGUGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531742.3
ncRNA:24   GUA-CAACCACCGCUGCUGCCACCA   1
  *||-|*|||||||||||=|||||||
targets:452   GAUCGGUGGUGGCGACGGCGGUGGU   476

1.5 PREDICTED: Glycine max vacuolar protein sorting-associated protein 36 (LOC100783044), mRNA vacuolar protein sorting-associated protein 36(LOC100783044) coding protein psRNATarget
XM_014761633.1
ncRNA:24   GUACAACCACCGCUGCUGCCACCA   1
  *|||*||||||||||||||*||||
targets:85   GAUGGUGGUGGCGACGACGAUGGU   108

1.5 PREDICTED: Glycine max glycine-rich protein HC1-like (LOC106794371), mRNA glycine-rich protein HC1-like(LOC106794371) coding protein psRNATarget