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BaseInfo

ncRNA ID	novel_gma_miR4275
Species	Glycine max
Class	miRNA
Genome position	Chr18:39593375-39593589 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045230;SRR2045237;SRR2045371;SRR2045372;SRR1294474;SRR1294475
Length	24
Mature sequence(if miRNA)	1 - UGUGAUGGUGUUGGAGGGUUUUGC - 24
Stem-loop(if miRNA)	--                                  UUU       C         UA             U    C     A   -              C      C   AAAAUUCUCCAACACCAUCACAUCCUCCAAGGUG   UUUUUCU AUCUUAGGG  ACAAAAAGGUAUU GUCU GGGAC CCA CUUCUCAACAACCC AAAACA A   ||||||||||||||||||||||||||||||||||   ||||||| |||||||||  ||||||||||||| |||| ||||| ||| |||||||||||||| ||||||   UUUUGGGAGGUUGUGGUAGUGUAGGAGGUUCCAC   AAAAAGA UGGGAUCCU  UGUUUUUCCAUAA CAGA UCCUG GGU GAAGAGUUGUUGGG UUUUGU U CG                                  UGU       A         UG             U    U     -   U              -      G
Stem-loop sequence	AAAAUUCUCCAACACCAUCACAUCCUCCAAGGUGUUUUUUUUCUCAUCUUAGGGUAACAAAAAGGUAUUUGUCUCGGGACACCACUUCUCAACAACCCCAAAACACAUGUGUUUUGGGUUGUUGAGAAGUUGGGUCCUUAGACUAAUACCUUUUUGUGUUCCUAGGGUAAGAAAAAUGUCACCUUGGAGGAUGUGAUGGUGUUGGAGGGUUUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT093295.1	ncRNA:24   CGUUUUGGGAGGUUGUGGUAGUGU   1   **||=|**|||||||||||||||| targets:884   AGAAGAGGCUCCAACACCAUCACA   907 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-17I1 unknown mRNA	NA	coding protein	psRNATarget
NM_001250579.2	ncRNA:24   CGUUUUGGGAGGUUGUGGUAGUGU   1   **||=|**|||||||||||||||| targets:882   AGAAGAGGCUCCAACACCAUCACA   905 Target Full Sequence	2.0	Glycine max transcription factor (WRKY10), mRNA	transcription factor(WRKY10)	coding protein	psRNATarget
EU375344.1	ncRNA:24   CGUUUUGGGAGGUUGUGGUAGUGU   1   **||=|**|||||||||||||||| targets:836   AGAAGAGGCUCCAACACCAUCACA   859 Target Full Sequence	2.0	Glycine max transcription factor (WRKY10) mRNA, complete cds	NA	coding protein	psRNATarget
BK005831.1	ncRNA:24   CGUUUUGGGAGGUUGUGGUAGUGU   1   **||=|**|||||||||||||||| targets:767   AGAAGAGGCUCCAACACCAUCACA   790 Target Full Sequence	2.0	TPA_inf: Glycine max transcription factor WRKY10 mRNA, complete cds	NA	coding protein	psRNATarget
XM_003548734.3	ncRNA:24   CGUUUUGGGA-GGUUGUGGUAGUGU   1   |||*|||||*-|||||||||||||| targets:146   GCACAACCCAACCAACACCAUCACA   170 Target Full Sequence	3.0	PREDICTED: Glycine max thioredoxin reductase NTRB-like (LOC100794363), mRNA	thioredoxin reductase NTRB-like(LOC100794363)	coding protein	psRNATarget