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BaseInfo

ncRNA ID ath-miR5650
Species Arabidopsis thaliana
Class miRNA
Genome position chr2:19686957-19687039 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 3 - UUGUUUUGGAUCUUAGAUACA - 23
Stem-loop(if miRNA) A                                 C   UCC
 UUUGUUUUGGAUCUUAGAUACACAUAUAGUUUG UUU   U
 ||||||||||||||||||||||||||||||||| |||
 AAACAAAACUUAGAAUCUAUGUGUAUAUCAAAC AAA   U
C                                 -   UAU
Stem-loop sequence AUUUGUUUUGGAUCUUAGAUACACAUAUAGUUUGCUUUUCCUUUAUAAACAAACUAUAUGUGUAUCUAAGAUUCAAAACAAAC

Reference

1 PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis";
Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN;
Genome Res. 22:163-176(2012).