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BaseInfo

ncRNA ID novel_gma_miR4246
Species Glycine max
Class miRNA
Genome position Chr10:11249908-11250100 [+]
Reference genome Glycine_max_v2.0
Source SRR2045228;SRR1451604
Length 24
Mature sequence(if miRNA) 1 - AAUGUUACAACUGUGGAAGAACCU - 24
Stem-loop(if miRNA) --          C                   A  CG                    C    A   UU          A       C CU      
  AAUGUUACAA UGUGGAAGAACCUUCUUCC UG  AUCUCGCGGAAGAAGUUCUU CGCA GAA  CACGGAAGAA GUUCUUC G  GUUGUAA
  |||||||||| ||||||||||||||||||| ||  |||||||||||||||||||| |||| |||  |||||||||| ||||||| |  ||||||U
  UUACAAUGUU ACACCUUCUUGGAAGAAGG AC  UAGAGUGCCUUCUUCAAGAA GCGU CUU  GUGCCUUCUU CAAGAAG C  CAACAUU
AA          A                   C  AG                    A    C   CG          C       C AU      
Stem-loop sequence AAUGUUACAACUGUGGAAGAACCUUCUUCCAUGCGAUCUCGCGGAAGAAGUUCUUCCGCAAGAAUUCACGGAAGAAAGUUCUUCCGCUGUUGUAAUUUACAACUACCGAAGAACCUUCUUCCGUGGCUUCCUGCGAAAGAACUUCUUCCGUGAGAUGACACGGAAGAAGGUUCUUCCACAAUUGUAACAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583449.2
ncRNA:24   UCCAAGAAGGUGUCAACAUUGUAA   1
  |||***||=|||||||||||||||
targets:230   AGGGAGUUUCACAGUUGUAACAUU   253

2.0 PREDICTED: Glycine max uncharacterized protein At1g28695-like (LOC100778192), mRNA uncharacterized protein At1g28695-like(LOC100778192) coding protein psRNATarget