ncRNA ID | novel_gma_miR4246 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:11249908-11250100 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045228;SRR1451604 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUACAACUGUGGAAGAACCU - 24 |
Stem-loop(if miRNA) |
--          C                   A  CG                    C    A   UU          A       C CU         AAUGUUACAA UGUGGAAGAACCUUCUUCC UG  AUCUCGCGGAAGAAGUUCUU CGCA GAA  CACGGAAGAA GUUCUUC G  GUUGUAA   |||||||||| ||||||||||||||||||| ||  |||||||||||||||||||| |||| |||  |||||||||| ||||||| |  ||||||U   UUACAAUGUU ACACCUUCUUGGAAGAAGG AC  UAGAGUGCCUUCUUCAAGAA GCGU CUU  GUGCCUUCUU CAAGAAG C  CAACAUU AA          A                   C  AG                    A    C   CG          C       C AU       |
Stem-loop sequence | AAUGUUACAACUGUGGAAGAACCUUCUUCCAUGCGAUCUCGCGGAAGAAGUUCUUCCGCAAGAAUUCACGGAAGAAAGUUCUUCCGCUGUUGUAAUUUACAACUACCGAAGAACCUUCUUCCGUGGCUUCCUGCGAAAGAACUUCUUCCGUGAGAUGACACGGAAGAAGGUUCUUCCACAAUUGUAACAUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583449.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized protein At1g28695-like (LOC100778192), mRNA | uncharacterized protein At1g28695-like(LOC100778192) | coding protein | psRNATarget |