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BaseInfo

ncRNA ID novel_gma_miR4234
Species Glycine max
Class miRNA
Genome position Chr17:18837394-18837449 [-]
Reference genome Glycine_max_v2.0
Source SRR2045228
Length 23
Mature sequence(if miRNA) 1 - CAAGGAAAGCAUCAAUGGCGGCU - 23
Stem-loop(if miRNA) --  A   C   -A          -   G
  CC CCA UGG  CUUUCCUUGC UAU G
  || ||| |||  |||||||||| |||
  GG GGU ACU  GAAAGGAACG AUA U
UC  C   A   AC          U   G
Stem-loop sequence CCACCACUGGACUUUCCUUGCUAUGGUGAUAUGCAAGGAAAGCAUCAAUGGCGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526943.3
ncRNA:23   UCGGCGGUAACUACGAAAGGAAC   1
  **==||*=|||||||||||||||
targets:880   UCUUGCAGUUGAUGCUUUCCUUG   902

2.0 PREDICTED: Glycine max cytochrome P450 71A1-like (LOC100792382), mRNA cytochrome P450 71A1-like(LOC100792382) coding protein psRNATarget
XM_006605010.1
ncRNA:23   UCGGCGGUAACUACGAAAGGAAC   1
  |||*||*||||||||*|||||||
targets:549   AGCGGCGAUUGAUGCCUUCCUUG   571

2.5 PREDICTED: Glycine max uncharacterized LOC102665506 (LOC102665506), mRNA uncharacterized LOC102665506(LOC102665506) coding protein psRNATarget