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BaseInfo

ncRNA ID	novel_gma_miR4227
Species	Glycine max
Class	miRNA
Genome position	Chr15:15736355-15736575 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045228;SRR1295516;SRR1295520;SRR1295521
Length	23
Mature sequence(if miRNA)	199 - AAUUUUGUUUACUGUACUUGCCC - 221
Stem-loop(if miRNA)	--         U      C    C    U  -   G  UG                              C       UAAU  A  A  A     ---      UUC    U   AAUUUUGUU ACUGUA UUGC CUAG CU UUA UC  GUUGCAUUUUUGCUGUUGAUAUUUUGAUUU AGCAUAU    CC UA CC UUUGU   UUUGUU   AAUG C   ||||||||| |||||| |||| |||| || ||| ||  |||||||||||||||||||||||||||||| |||||||    || || || |||||   ||||||   ||||   UUAGAACAA UGACGU AACG GAUU GA AAU AG  UAACGUAAAAGCGAUAACUAUAAAACUAAA UCGUAUA    GG AU GG AAACA   AAAUAA   UUAC U AG         U      U    A    U  U   A  GU                              U       UUUU  -  A  G     CUA      UUU    C
Stem-loop sequence	AAUUUUGUUUACUGUACUUGCCCUAGUCUUUAGUCUGGUUGCAUUUUUGCUGUUGAUAUUUUGAUUUCAGCAUAUUAAUCCAUAACCAUUUGUUUUGUUUUCAAUGUCUCCAUUUUUAAUAAAAUCACAAAGGGAUAGGUUUUAUAUGCUUAAAUCAAAAUAUCAAUAGCGAAAAUGCAAUUGGAAUAAUAGUUUAGAGCAAUUGCAGUUAACAAGAUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006601198.2	ncRNA:23   CCCGUUCAUGUCAUUUGUUUUAA   1   **|||||*|*||||||||||||| targets:25   AAGCAAGGAAAGUAAACAAAAUU   47 Target Full Sequence	2.0	PREDICTED: Glycine max tetratricopeptide repeat protein 7A-like (LOC100795958), transcript variant X4, mRNA	tetratricopeptide repeat protein 7A-like(LOC100795958)	coding protein	psRNATarget
XM_006601197.2	ncRNA:23   CCCGUUCAUGUCAUUUGUUUUAA   1   **|||||*|*||||||||||||| targets:22   AAGCAAGGAAAGUAAACAAAAUU   44 Target Full Sequence	2.0	PREDICTED: Glycine max tetratricopeptide repeat protein 7A-like (LOC100795958), transcript variant X2, mRNA	tetratricopeptide repeat protein 7A-like(LOC100795958)	coding protein	psRNATarget
XM_006601196.2	ncRNA:23   CCCGUUCAUGUCAUUUGUUUUAA   1   **|||||*|*||||||||||||| targets:22   AAGCAAGGAAAGUAAACAAAAUU   44 Target Full Sequence	2.0	PREDICTED: Glycine max tetratricopeptide repeat protein 7A-like (LOC100795958), transcript variant X3, mRNA	tetratricopeptide repeat protein 7A-like(LOC100795958)	coding protein	psRNATarget
XM_003550257.3	ncRNA:23   CCCGUUCAUGUCAUUUGUUUUAA   1   **|||||*|*||||||||||||| targets:22   AAGCAAGGAAAGUAAACAAAAUU   44 Target Full Sequence	2.0	PREDICTED: Glycine max tetratricopeptide repeat protein 7A-like (LOC100795958), transcript variant X1, mRNA	tetratricopeptide repeat protein 7A-like(LOC100795958)	coding protein	psRNATarget
XM_003542527.3	ncRNA:23   CCCGUUCAUGUCAUUUGUUUUAA   1   ***||||||*||||||||||=|| targets:70   AACCAAGUAAAGUAAACAAAGUU   92 Target Full Sequence	2.5	PREDICTED: Glycine max protein CHUP1, chloroplastic-like (LOC100776941), mRNA	protein CHUP1, chloroplastic-like(LOC100776941)	coding protein	psRNATarget