Search result

BaseInfo

ncRNA ID novel_gma_miR4225
Species Glycine max
Class miRNA
Genome position Chr15:44568252-44568328 [-]
Reference genome Glycine_max_v2.0
Source SRR2045228
Length 22
Mature sequence(if miRNA) 1 - CCGGAGGUCGUCGCGGCUGCGU - 22
Stem-loop(if miRNA) -- A   A    U  -  G    -   -U  U     C  U
  G CAG UGCG CG CU CCGG AGC  CG CACCG CG U
  | ||| |||| || || |||| |||  || ||||| ||
  C GUC GCGC GC GG GGCC UCG  GC GUGGC GU U
UG -   G    U  U  A    G   CU  -     C  G
Stem-loop sequence GACAGAUGCGUCGCUGCCGGAGCUCGUCACCGCCGUUUGUGCCGGUGCGUCGCUGCCGGAGGUCGUCGCGGCUGCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604129.2
ncRNA:22   UGCGUCGGCGCUGCUGGAGGCC   1
  |||=||||||||||||||||||
targets:5   ACGUAGCCGCGACGACCUCCGG   26

1.0 PREDICTED: Glycine max uncharacterized LOC102662903 (LOC102662903), transcript variant X1, mRNA uncharacterized LOC102662903(LOC102662903) coding protein psRNATarget
XM_006604130.2
ncRNA:22   UGCGUCGGCGCUGCUGGAGGCC   1
  |||=||||||||||||||||||
targets:5   ACGUAGCCGCGACGACCUCCGG   26

1.0 PREDICTED: Glycine max uncharacterized LOC102662903 (LOC102662903), transcript variant X2, mRNA uncharacterized LOC102662903(LOC102662903) coding protein psRNATarget