ncRNA ID | novel_gma_miR4215 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:14532278-14532435 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045228 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAAGAAUGUGACAUGUGGCAGU - 24 |
Stem-loop(if miRNA) |
--UA                                      U             ---A      GAAAACAACA   C     UCACGUGUCACGUUCUUAUUGGAUGAUGACUGUCAUGU UCAUGUUCUGAUU    GUCAAU          AUG A     |||||||||||||||||||||||||||||||||||||| |||||||||||||    ||||||          ||| U     GGUGUACAGUGUAAGAAUAACCUACUACUGACAGUGCA AGUACAAGACUAA    CAGUUG          UAC U UGAC                                      C             CCUA      AGGUAUUUUC   U |
Stem-loop sequence | UAUCACGUGUCACGUUCUUAUUGGAUGAUGACUGUCAUGUUUCAUGUUCUGAUUAGUCAAUGAAAACAACAAUGCAUUUCAUCUUUUAUGGAGUUGACAUCCAAUCAGAACAUGACACGUGACAGUCAUCAUCCAAUAAGAAUGUGACAUGUGGCAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549182.3 |
|
2.5 | PREDICTED: Glycine max molybdate transporter 1-like (LOC100779658), mRNA | molybdate transporter 1-like(LOC100779658) | coding protein | psRNATarget | |||||||||
HI410445.1 |
|
3.0 | Sequence 8570 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
LQ242575.1 |
|
3.0 | Sequence 8570 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB170906.1 |
|
3.0 | Sequence 8570 from Patent EP2559767 | NA | coding protein | psRNATarget |