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BaseInfo

ncRNA ID	novel_gma_miR4202
Species	Glycine max
Class	miRNA
Genome position	Chr6:42949361-42949487 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045228;SRR1295516
Length	24
Mature sequence(if miRNA)	104 - GACCGAUGUAGAAUGCUGAGCAUU - 127
Stem-loop(if miRNA)	--                   G           A AC  AGCC         AUG       G   GACCGAUGUAGAAUGCUGA CAUUCUAAGAC G  AC    GAGGGACCG   UAGAAUG U   ||||||||||||||||||| ||||||||||| |  ||    |||||||||   ||||||| G   CUGGCUACAUCUUACGAUU GUAAGAUUCUG C  UG    CUUUCUGGU   AUCUUAC A UU                   G           C AA  CACA         AAA       G
Stem-loop sequence	GACCGAUGUAGAAUGCUGAGCAUUCUAAGACAGACACAGCCGAGGGACCGAUGUAGAAUGGUGAGCAUUCUAAAAUGGUCUUUCACACGUAACCGUCUUAGAAUGGUUAGCAUUCUACAUCGGUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:928   AAUGCAUAGCAUUCUACAUCGGUC   951 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1041   AAUGCAUAGCAUUCUACAUCGGUC   1064 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1201   AAUGCAUAGCAUUCUACAUCGGUC   1224 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1478   AAUGCAUAGCAUUCUACAUCGGUC   1501 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1641   AAUGCAUAGCAUUCUACAUCGGUC   1664 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014767461.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   ||||*|||*|||||*||||||||| targets:585   AAUGAUCAUCAUUCAACAUCGGUC   608 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_003539359.3	ncRNA:24   UUACGAGU-CGUAAGAUGUAGCCAG   1   ||*|-|||-|||||||||||||||= targets:2798   AAAG-UCAUGCAUUCUACAUCGGUU   2821 Target Full Sequence	3.0	PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA	MLO-like protein 6(LOC100776714)	coding protein	psRNATarget