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BaseInfo

ncRNA ID	novel_gma_miR4200
Species	Glycine max
Class	miRNA
Genome position	Chr6:39910676-39910770 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045228
Length	25
Mature sequence(if miRNA)	71 - AAUUAGAACAUGACAUGUGACAGUC - 95
Stem-loop(if miRNA)	--     U                   AAU    CUCC UG       AA   CUGUC CGUGUCAUGUUUUGAUUGA   UCAA    A  AAAAUAA  U   ||||| |||||||||||||||||||   ||||    |  |||||||   GACAG GUACAGUACAAGAUUAACU   AGUU    U  UUUUGUU  A CU     U                   ---    --AC GU       AC
Stem-loop sequence	CUGUCUCGUGUCAUGUUUUGAUUGAAAUUCAACUCCAUGAAAAUAAAAUACAUUGUUUUUGUCAUUGAUCAAUUAGAACAUGACAUGUGACAGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ242574.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:15   GACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.0	Sequence 8569 from Patent EP2985353	NA	coding protein	psRNATarget
HI410444.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:15   GACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.0	Sequence 8569 from Patent EP2074227	NA	coding protein	psRNATarget
JB170905.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:15   GACUGUCACGUGUCAUGUUCUAAUU   39 Target Full Sequence	1.0	Sequence 8569 from Patent EP2559767	NA	coding protein	psRNATarget
HI410445.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:76   GACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.0	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:76   GACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.0	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
JB170906.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||||||||||| targets:76   GACUGUCACGUGUCAUGUUCUAAUU   100 Target Full Sequence	1.0	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
AK245140.1	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   |||||||||=||||||*|||||||| targets:1507   GACUGUCACGUGUCAUAUUCUAAUU   1531 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-21-P01	NA	coding protein	psRNATarget
XM_006602607.2	ncRNA:25   CUGACAGUGUACAGUACAAGAUUAA   1   ||=||||||=||||||*|||||||| targets:565   GAUUGUCACGUGUCAUAUUCUAAUU   589 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget