ncRNA ID | novel_gma_miR4199 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:34238519-34238605 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045228 |
Length | 22 |
Mature sequence(if miRNA) | 66 - AUGGACCUCGUCGGGCUGUCGA - 87 |
Stem-loop(if miRNA) |
--   CC          A        UAGAA     ---C  -      GGC  CUCGACGGGG UCAUGGGG     AUCGA    AU CCCC   |||  |||||||||| ||||||||     |||||    || |||U   CUG  GGGCUGCUCC GGUACUUC     UAGCU    UA GGGU AG   UC          A        --UAG     CUCA  C    |
Stem-loop sequence | GGCCCCUCGACGGGGAUCAUGGGGUAGAAAUCGACAUCCCCUUGGGCAUACUCUCGAUGAUCUUCAUGGACCUCGUCGGGCUGUCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003523913.2 |
|
3.0 | PREDICTED: Glycine max protein spotted leaf 11-like (LOC100803111), mRNA | protein spotted leaf 11-like(LOC100803111) | coding protein | psRNATarget |