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BaseInfo

ncRNA ID novel_gma_miR4199
Species Glycine max
Class miRNA
Genome position Chr6:34238519-34238605 [+]
Reference genome Glycine_max_v2.0
Source SRR2045228
Length 22
Mature sequence(if miRNA) 66 - AUGGACCUCGUCGGGCUGUCGA - 87
Stem-loop(if miRNA) --   CC          A        UAGAA     ---C  -   
  GGC  CUCGACGGGG UCAUGGGG     AUCGA    AU CCCC
  |||  |||||||||| ||||||||     |||||    || |||U
  CUG  GGGCUGCUCC GGUACUUC     UAGCU    UA GGGU
AG   UC          A        --UAG     CUCA  C   
Stem-loop sequence GGCCCCUCGACGGGGAUCAUGGGGUAGAAAUCGACAUCCCCUUGGGCAUACUCUCGAUGAUCUUCAUGGACCUCGUCGGGCUGUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523913.2
ncRNA:22   AG-CUGUCGGGCUGCUCCAGGUA   1
  ||-||=**|||||||||||||||
targets:439   UCUGAUUCCCCGACGAGGUCCAU   461

3.0 PREDICTED: Glycine max protein spotted leaf 11-like (LOC100803111), mRNA protein spotted leaf 11-like(LOC100803111) coding protein psRNATarget