ncRNA ID | novel_gma_miR4190 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:419801-419894 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753108 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCGAAAUUGAACGAGGAAUCGCCU - 24 |
Stem-loop(if miRNA) |
--UC         C       -  CCU  CG   CC   -GAC   UU     GAAAUUGAA GAGGAAU CG   GA  GGA  UCU    UGC  U     ||||||||| ||||||| ||   ||  |||  |||    |||     UUUUAACUU CUCCUUA GU   CU  UCU  AGG    ACG  A CGAU         A       A  CCC  AA   CA   AAAU   UC |
Stem-loop sequence | UCGAAAUUGAACGAGGAAUCGCCUGACGGGACCUCUGACUGCUUUACUGCAUAAAGGAACUCUAAUCCCCUGAAUUCCUCAUUCAAUUUUUAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |