ncRNA ID | novel_gma_miR4180 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:5341118-5341281 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753108;SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 144 - UAUAAAAACUGAUGUUAACUU - 164 |
Stem-loop(if miRNA) |
--                                   CA     -ACUC                A  UUU          UCG   UAUAAAAACUGAUGUUAACUUCAAAACGUUAAUAU  GUUUC     AAAAAUCGAUGUUAAC UU   UAUAUUAACA   G   |||||||||||||||||||||||||||||||||||  |||||     |||||||||||||||| ||   ||||||||||   AUGUUUUUGGCUACAAUUGAAGUUUUGCAAUUGUA  UAAAG     UUUUUAGCUACAAUUG AA   AUGUAAUUGU   U AC                                   AC     ACAUU                -  --U          UUU |
Stem-loop sequence | UAUAAAAACUGAUGUUAACUUCAAAACGUUAAUAUCAGUUUCACUCAAAAAUCGAUGUUAACAUUUUUUAUAUUAACAUCGGUUUUUGUUAAUGUAUAAGUUAACAUCGAUUUUUUUACAGAAAUCAAUGUUAACGUUUUGAAGUUAACAUCGGUUUUUGUACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003554303.3 |
|
2.5 | PREDICTED: Glycine max WRKY transcription factor 44-like (LOC100794069), mRNA | WRKY transcription factor 44-like(LOC100794069) | coding protein | psRNATarget |