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BaseInfo

ncRNA ID novel_gma_miR4180
Species Glycine max
Class miRNA
Genome position Chr10:5341118-5341281 [-]
Reference genome Glycine_max_v2.0
Source SRR1753108;SRR1451621
Length 21
Mature sequence(if miRNA) 144 - UAUAAAAACUGAUGUUAACUU - 164
Stem-loop(if miRNA) --                                   CA     -ACUC                A  UUU          UCG
  UAUAAAAACUGAUGUUAACUUCAAAACGUUAAUAU  GUUUC     AAAAAUCGAUGUUAAC UU   UAUAUUAACA   G
  |||||||||||||||||||||||||||||||||||  |||||     |||||||||||||||| ||   ||||||||||
  AUGUUUUUGGCUACAAUUGAAGUUUUGCAAUUGUA  UAAAG     UUUUUAGCUACAAUUG AA   AUGUAAUUGU   U
AC                                   AC     ACAUU                -  --U          UUU
Stem-loop sequence UAUAAAAACUGAUGUUAACUUCAAAACGUUAAUAUCAGUUUCACUCAAAAAUCGAUGUUAACAUUUUUUAUAUUAACAUCGGUUUUUGUUAAUGUAUAAGUUAACAUCGAUUUUUUUACAGAAAUCAAUGUUAACGUUUUGAAGUUAACAUCGGUUUUUGUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554303.3
ncRNA:21   UUCAAUUGUAGUCAAAAAUAU   1
  |=|||||**||||||||||||
targets:340   AGGUUAAACUCAGUUUUUAUA   360

2.5 PREDICTED: Glycine max WRKY transcription factor 44-like (LOC100794069), mRNA WRKY transcription factor 44-like(LOC100794069) coding protein psRNATarget