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BaseInfo

ncRNA ID novel_gma_miR4177
Species Glycine max
Class miRNA
Genome position Chr20:14497502-14497594 [-]
Reference genome Glycine_max_v2.0
Source SRR1753108
Length 22
Mature sequence(if miRNA) 1 - CCUGUUGGACUUAUCCGGGUCU - 22
Stem-loop(if miRNA) --    U C     G        A     --AA GACUGGCAGAGUC
  ACCU G UAGGU CGACGGGG CUUCG    C             C
  |||| | ||||| |||||||| |||||    |             U
  UGGG C AUUCA GUUGUCCC GGAGC    A             G
UC    C U     G        G     CUAA GGGCGGAACUAGU
Stem-loop sequence ACCUUGCUAGGUGCGACGGGGACUUCGAACGACUGGCAGAGUCCUGUGAUCAAGGCGGGAAAUCCGAGGGCCCUGUUGGACUUAUCCGGGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763595.1
ncRNA:22   UCUGGGCCUAUUCAGGUUGUCC   1
  =||||=|||*||||||||||||
targets:1572   GGACCUGGAGAAGUCCAACAGG   1593

2.5 PREDICTED: Glycine max uncharacterized LOC106795060 (LOC106795060), mRNA uncharacterized LOC106795060(LOC106795060) coding protein psRNATarget