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BaseInfo

ncRNA ID novel_gma_miR4175
Species Glycine max
Class miRNA
Genome position Chr20:20178106-20178247 [-]
Reference genome Glycine_max_v2.0
Source SRR1753108
Length 21
Mature sequence(if miRNA) 1 - CAACAUCGGUUUUAAAAUAAC - 21
Stem-loop(if miRNA) --                                   A       A     U       U    U ACACU
  UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACGACA CGGUUUU AAAUA CCGAUGU AAAA C     A
  ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |
  AUAAAAUUUUGGCUACAACAUUCACGAAUUGCUGU GCCGAAA UUUAU GGCUACA UUUU G     A
CA                                   A       G     U       U    C AACUA
Stem-loop sequence UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACGACAACGGUUUUAAAAUAUCCGAUGUUAAAAUCACACUAAAUCAAGCUUUUUACAUCGGUUAUUUGAAAGCCGAUGUCGUUAAGCACUUACAACAUCGGUUUUAAAAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764817.1
ncRNA:21   CAAUAAAAUUUUGGCUACAAC   1
  *||||||*|||||=|||||||
targets:44   UUUAUUUAAAAACUGAUGUUG   64

2.5 PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA uncharacterized LOC102659453(LOC102659453) coding protein psRNATarget