ncRNA ID | novel_gma_miR4175 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:20178106-20178247 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753108 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAACAUCGGUUUUAAAAUAAC - 21 |
Stem-loop(if miRNA) |
--                                   A       A     U       U    U ACACU   UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACGACA CGGUUUU AAAUA CCGAUGU AAAA C     A   ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |   AUAAAAUUUUGGCUACAACAUUCACGAAUUGCUGU GCCGAAA UUUAU GGCUACA UUUU G     A CA                                   A       G     U       U    C AACUA |
Stem-loop sequence | UAUUUUAAAAUCGAUGUUGUAAGUGCUUAACGACAACGGUUUUAAAAUAUCCGAUGUUAAAAUCACACUAAAUCAAGCUUUUUACAUCGGUUAUUUGAAAGCCGAUGUCGUUAAGCACUUACAACAUCGGUUUUAAAAUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014764817.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA | uncharacterized LOC102659453(LOC102659453) | coding protein | psRNATarget |