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BaseInfo

ncRNA ID novel_gma_miR4163
Species Glycine max
Class miRNA
Genome position Chr7:37824196-37824307 [+]
Reference genome Glycine_max_v2.0
Source SRR1292924
Length 24
Mature sequence(if miRNA) 1 - AUCCAAAUCAAGGGCCUAGACAUU - 24
Stem-loop(if miRNA) --      ---    AG     AGACAUU  CU     G A     --UUUUGU  UG  C
  AUCCAA   AUCA  GGCCU       UC  UGAAU U CUCUA        GU  AU U
  ||||||   ||||  |||||       ||  ||||| | |||||        ||  ||
  UAGGUU   UAGU  UCGGA       AG  ACUUG G GAGGU        CA  UA A
GG      UGA    GU     ----GUU  -U     G C     UUUGAUGU  GU  G
Stem-loop sequence AUCCAAAUCAAGGGCCUAGACAUUUCCUUGAAUGUACUCUAUUUUGUGUUGAUCUAGAUUGACUGUAGUUUUGGAGCGGGUUCAUGAUUGAGGCUUGUGAUAGUUUGGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765991.1
ncRNA:24   UUACAGAUCCGGGAACUAAACCUA   1
  |=|-|=||*|=|||||||||||||
targets:1715   AGU-UUUAUGUCCUUGAUUUGGAU   1737

3.0 PREDICTED: Glycine max arogenate dehydratase 3, chloroplastic-like (LOC100785311), transcript variant X2, mRNA arogenate dehydratase 3, chloroplastic-like(LOC100785311) coding protein psRNATarget
XM_006582034.2
ncRNA:24   UUACAGAUCCGGGAAC-UAAACCUA   1
  *****|||||||||||-||||||||
targets:1321   UUCAGCUAGGCCCUUGGAUUUGGAU   1345

3.0 PREDICTED: Glycine max sodium-coupled neutral amino acid transporter 4-like (LOC100778699), mRNA sodium-coupled neutral amino acid transporter 4-like(LOC100778699) coding protein psRNATarget