ncRNA ID | novel_gma_miR4163 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:37824196-37824307 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1292924 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCAAAUCAAGGGCCUAGACAUU - 24 |
Stem-loop(if miRNA) |
--      ---    AG     AGACAUU  CU     G A     --UUUUGU  UG  C   AUCCAA   AUCA  GGCCU       UC  UGAAU U CUCUA        GU  AU U   ||||||   ||||  |||||       ||  ||||| | |||||        ||  ||   UAGGUU   UAGU  UCGGA       AG  ACUUG G GAGGU        CA  UA A GG      UGA    GU     ----GUU  -U     G C     UUUGAUGU  GU  G |
Stem-loop sequence | AUCCAAAUCAAGGGCCUAGACAUUUCCUUGAAUGUACUCUAUUUUGUGUUGAUCUAGAUUGACUGUAGUUUUGGAGCGGGUUCAUGAUUGAGGCUUGUGAUAGUUUGGAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765991.1 |
|
3.0 | PREDICTED: Glycine max arogenate dehydratase 3, chloroplastic-like (LOC100785311), transcript variant X2, mRNA | arogenate dehydratase 3, chloroplastic-like(LOC100785311) | coding protein | psRNATarget | |||||||||
XM_006582034.2 |
|
3.0 | PREDICTED: Glycine max sodium-coupled neutral amino acid transporter 4-like (LOC100778699), mRNA | sodium-coupled neutral amino acid transporter 4-like(LOC100778699) | coding protein | psRNATarget |