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BaseInfo

ncRNA ID novel_gma_miR4161
Species Glycine max
Class miRNA
Genome position Chr14:10672814-10672867 [-]
Reference genome Glycine_max_v2.0
Source SRR1753108
Length 21
Mature sequence(if miRNA) 1 - CUUCUUCCGGAAUUGGGCUUC - 21
Stem-loop(if miRNA) --  G      G          U   C
  AG CCAAUU CGGAAGAAGU CUU C
  || |||||| |||||||||| |||
  UC GGUUAA GCCUUCUUCA GAA G
CU  G      G          C   G
Stem-loop sequence AGGCCAAUUGCGGAAGAAGUUCUUCCGGAAGCACUUCUUCCGGAAUUGGGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544257.3
ncRNA:21   CUUCGGGUUAAGGCCUUCUUC   1
  |||||=||||||||*||||||
targets:1437   GAAGCUCAAUUCCGAAAGAAG   1457

2.5 PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100779427), mRNA probable inactive receptor-like protein kinase At3g56050(LOC100779427) coding protein psRNATarget
XM_003529258.3
ncRNA:21   CUUCGGGUUAAGGCCUUCUUC   1
  *||||=|||||||*|||||||
targets:1347   AAAGCUCAAUUCCAGAAGAAG   1367

2.5 PREDICTED: Glycine max mitochondrial inner membrane protein OXA1-like (LOC100817052), mRNA mitochondrial inner membrane protein OXA1-like(LOC100817052) coding protein psRNATarget