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BaseInfo

ncRNA ID novel_gma_miR4154
Species Glycine max
Class miRNA
Genome position Chr13:27036579-27036664 [+]
Reference genome Glycine_max_v2.0
Source SRR1753107;SRR835766;SRR835768;SRR835770;SRR1451612
Length 21
Mature sequence(if miRNA) 1 - AGAGGUGUAUGGAGUGAGAGA - 21
Stem-loop(if miRNA) --   -                  A     -      UUUUC    
  AGA GGUGUAUGGAGUGAGAGA GGGAA AGGGUA     CGAUU
  ||| |||||||||||||||||| ||||| ||||||     ||||C
  UCU CUACAUACCUUACUCUCU CCCUU UCUCAU     GCUGU
AG   G                  -     C      ----U    
Stem-loop sequence AGAGGUGUAUGGAGUGAGAGAAGGGAAAGGGUAUUUUCCGAUUCUGUCGUUACUCUCUUCCCUCUCUCAUUCCAUACAUCGUCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171032.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACACCUCU   96

0.0 Sequence 8696 from Patent EP2559767 NA coding protein psRNATarget
LQ242701.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACACCUCU   96

0.0 Sequence 8696 from Patent EP2985353 NA coding protein psRNATarget
HI410571.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  |||||||||||||||||||||
targets:76   UCUCUCACUCCAUACACCUCU   96

0.0 Sequence 8696 from Patent EP2074227 NA coding protein psRNATarget
HI410589.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  ||||||||||||||||=||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

1.5 Sequence 8714 from Patent EP2074227 NA coding protein psRNATarget
JB171050.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  ||||||||||||||||=||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

1.5 Sequence 8714 from Patent EP2559767 NA coding protein psRNATarget
LQ242719.1
ncRNA:21   AGAGAGUGAGGUAUGUGGAGA   1
  ||||||||||||||||=||||
targets:76   UCUCUCACUCCAUACAUCUCU   96

1.5 Sequence 8714 from Patent EP2985353 NA coding protein psRNATarget