ncRNA ID | novel_gma_miR4147 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:47654266-47654329 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753107;SRR1295521;SRR1451622 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUACAACCGUCUUUGAAAUCGCCU - 24 |
Stem-loop(if miRNA) |
--UU            AC     -UGG   UU     GAUUUCAAAGAC  UUGUA    GGC  U     ||||||||||||  |||||    |||  U     CUAAAGUUUCUG  AACAU    CUG  C UCCG            CC     UUGG   CA |
Stem-loop sequence | UUGAUUUCAAAGACACUUGUAUGGGGCUUUUCACGUCGGUUUACAACCGUCUUUGAAAUCGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587806.2 |
|
2.5 | PREDICTED: Glycine max probable methyltransferase PMT13 (LOC100782539), transcript variant X2, mRNA | probable methyltransferase PMT13(LOC100782539) | coding protein | psRNATarget | |||||||||
XM_003534546.3 |
|
2.5 | PREDICTED: Glycine max probable methyltransferase PMT13 (LOC100782539), transcript variant X1, mRNA | probable methyltransferase PMT13(LOC100782539) | coding protein | psRNATarget |