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BaseInfo

ncRNA ID novel_gma_miR4147
Species Glycine max
Class miRNA
Genome position Chr8:47654266-47654329 [-]
Reference genome Glycine_max_v2.0
Source SRR1753107;SRR1295521;SRR1451622
Length 24
Mature sequence(if miRNA) 1 - UUACAACCGUCUUUGAAAUCGCCU - 24
Stem-loop(if miRNA) --UU            AC     -UGG   UU
    GAUUUCAAAGAC  UUGUA    GGC  U
    ||||||||||||  |||||    |||  U
    CUAAAGUUUCUG  AACAU    CUG  C
UCCG            CC     UUGG   CA
Stem-loop sequence UUGAUUUCAAAGACACUUGUAUGGGGCUUUUCACGUCGGUUUACAACCGUCUUUGAAAUCGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587806.2
ncRNA:24   UCCGCUAAAGUUUCUGCCAACAUU   1
  ***|*|*||||||||=||||||||
targets:2239   UCUCAACUUCAAAGAUGGUUGUAA   2262

2.5 PREDICTED: Glycine max probable methyltransferase PMT13 (LOC100782539), transcript variant X2, mRNA probable methyltransferase PMT13(LOC100782539) coding protein psRNATarget
XM_003534546.3
ncRNA:24   UCCGCUAAAGUUUCUGCCAACAUU   1
  ***|*|*||||||||=||||||||
targets:2347   UCUCAACUUCAAAGAUGGUUGUAA   2370

2.5 PREDICTED: Glycine max probable methyltransferase PMT13 (LOC100782539), transcript variant X1, mRNA probable methyltransferase PMT13(LOC100782539) coding protein psRNATarget