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BaseInfo

ncRNA ID novel_gma_miR4146
Species Glycine max
Class miRNA
Genome position Chr7:24858394-24858479 [-]
Reference genome Glycine_max_v2.0
Source SRR1753107
Length 22
Mature sequence(if miRNA) 65 - UCUUUCUAAGACGGUUUUAAGC - 86
Stem-loop(if miRNA) --U       A          AGC                    
   CUUUCUA GACGGUUUUA   UAAAAAUUGUCUUAAAAGGUA
   ||||||| ||||||||||   ||||||||||||||||||||C
   GAAAGAU CUGCCAAGGU   AUUUUUAGCAGAAUUUUUUAC
ACU       G          ---                    
Stem-loop sequence UCUUUCUAAGACGGUUUUAAGCUAAAAAUUGUCUUAAAAGGUACCAUUUUUUAAGACGAUUUUUAUGGAACCGUCGUAGAAAGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763138.1
ncRNA:22   CGAAUUUUGGCAGAAUCUUUCU   1
  *||*||||||*|||||||||||
targets:1590   ACUAAAAACCAUCUUAGAAAGA   1611

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:22   CGAAUUUUGGCAGAAUCUUUCU   1
  *||*||||||*|||||||||||
targets:2299   ACUAAAAACCAUCUUAGAAAGA   2320

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget