ncRNA ID | novel_gma_miR4144 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:13378240-13378381 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294486 |
Length | 23 |
Mature sequence(if miRNA) | 1 - ACCGAUGUAGAAUGUCAGAAUUC - 23 |
Stem-loop(if miRNA) |
--AUGA   G                                    -AUCCUA                UAA       UGA CAUUUUACAUCGGUUAUUAGGACAACCGAUGUAGAA       CAUUCUAAGACGGGUU   A       ||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||       ACU GUAAGAUGUAGCCAAUAAUCCUGUUGGCUACAUCUU       GUAAGAUUCUGCCCAA   G CUUAAG   -                                    CAUAUGG                CUA |
Stem-loop sequence | AUGAUGAGCAUUUUACAUCGGUUAUUAGGACAACCGAUGUAGAAAUCCUACAUUCUAAGACGGGUUUAAAGAUCAACCCGUCUUAGAAUGGGUAUACUUCUACAUCGGUUGUCCUAAUAACCGAUGUAGAAUGUCAGAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
3.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |