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BaseInfo

ncRNA ID novel_gma_miR4144
Species Glycine max
Class miRNA
Genome position Chr8:13378240-13378381 [-]
Reference genome Glycine_max_v2.0
Source SRR1294486
Length 23
Mature sequence(if miRNA) 1 - ACCGAUGUAGAAUGUCAGAAUUC - 23
Stem-loop(if miRNA) --AUGA   G                                    -AUCCUA                UAA
      UGA CAUUUUACAUCGGUUAUUAGGACAACCGAUGUAGAA       CAUUCUAAGACGGGUU   A
      ||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||
      ACU GUAAGAUGUAGCCAAUAAUCCUGUUGGCUACAUCUU       GUAAGAUUCUGCCCAA   G
CUUAAG   -                                    CAUAUGG                CUA
Stem-loop sequence AUGAUGAGCAUUUUACAUCGGUUAUUAGGACAACCGAUGUAGAAAUCCUACAUUCUAAGACGGGUUUAAAGAUCAACCCGUCUUAGAAUGGGUAUACUUCUACAUCGGUUGUCCUAAUAACCGAUGUAGAAUGUCAGAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:23   CUUA-AGACUGUAAGAUGUAGCCA   1
  ||||-||*||||||||||||||||
targets:2142   GAAUGUCCGACAUUCUACAUCGGU   2165

3.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget