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BaseInfo

ncRNA ID novel_gma_miR4138
Species Glycine max
Class miRNA
Genome position Chr11:20760368-20760430 [+]
Reference genome Glycine_max_v2.0
Source SRR1753107
Length 22
Mature sequence(if miRNA) 42 - UUGCAGAUAUUUUAGCUUUGUU - 63
Stem-loop(if miRNA) --      AA       -G    -----   AAGA
  CAAAGC  GGGAUAU  GCGA     GCC    G
  ||||||  |||||||  ||||     |||
  GUUUCG  UUUUAUA  CGUU     CGG    A
UU      -A       GA    UGCCC   GUGA
Stem-loop sequence CAAAGCAAGGGAUAUGGCGAGCCAAGAGAAGUGGGCCCCGUUUGCAGAUAUUUUAGCUUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520671.3
ncRNA:22   UUGUUUCGAUUUUAUAGACGUU   1
  ***|||*||||||||||||=||
targets:942   UCAAAACCUAAAAUAUCUGUAA   963

2.5 PREDICTED: Glycine max RING-H2 finger protein ATL70-like (LOC100811799), mRNA RING-H2 finger protein ATL70-like(LOC100811799) coding protein psRNATarget