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BaseInfo

ncRNA ID novel_gma_miR4135
Species Glycine max
Class miRNA
Genome position Chr19:17980661-17980717 [-]
Reference genome Glycine_max_v2.0
Source SRR1753107
Length 21
Mature sequence(if miRNA) 37 - UGUGUAGUCCUCUGCAGGCGA - 57
Stem-loop(if miRNA) -UG    -      U   GG -      G
   UGUA GUCCUC GCA  C GAGGAU U
   |||| |||||| |||  | |||||| G
   AUAU CAGGAG UGU  G CUCCUG U
CUG    G      -   AA U      A
Stem-loop sequence UGUGUAGUCCUCUGCAGGCGAGGAUGUGUAGUCCUCUGAAUGUGAGGACGUAUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763724.1
ncRNA:21   AGCGGACGUCUCCUGAUGUGU   1
  **||=|*|||||||||||||*
targets:663   GAGCUUUCAGAGGACUACACU   683

3.0 PREDICTED: Glycine max uncharacterized LOC100803983 (LOC100803983), transcript variant X2, mRNA uncharacterized LOC100803983(LOC100803983) coding protein psRNATarget
XM_003538597.3
ncRNA:21   AGCGGACGUCUCCUGAUGUGU   1
  **||=|*|||||||||||||*
targets:1150   GAGCUUUCAGAGGACUACACU   1170

3.0 PREDICTED: Glycine max uncharacterized LOC100803983 (LOC100803983), transcript variant X1, mRNA uncharacterized LOC100803983(LOC100803983) coding protein psRNATarget