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BaseInfo

ncRNA ID novel_gma_miR4134
Species Glycine max
Class miRNA
Genome position Chr19:23369141-23369239 [-]
Reference genome Glycine_max_v2.0
Source SRR1753107
Length 21
Mature sequence(if miRNA) 1 - UGAGGGACUGGAACCAGAGAA - 21
Stem-loop(if miRNA) --   GG       U   -AA       AAUAUAUAUACUGCCUA UUUCGAAAACUG
  CUC  GGUUUUA UCU   GCGUUUU                 C            G
  |||  ||||||| |||   |||||||                 |            C
  GAG  CCAAGGU AGG   UGCAAAG                 G            C
AA   -A       C   GAG       ----------------A AUGCGGGCAGCC
Stem-loop sequence CUCGGGGUUUUAUUCUAAGCGUUUUAAUAUAUAUACUGCCUACUUUCGAAAACUGGCCCCGACGGGCGUAGAGAAACGUGAGGGACUGGAACCAGAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538594.3
ncRNA:21   AAGAGACCAAGGUCAGGGAGU   1
  *||||||*|||*|||||||||
targets:315   AUCUCUGCUUCAAGUCCCUCA   335

2.5 PREDICTED: Glycine max uncharacterized LOC100802391 (LOC100802391), mRNA uncharacterized LOC100802391(LOC100802391) coding protein psRNATarget
XM_006606362.2
ncRNA:21   AAGAGACCAAGGUCAGGGAGU   1
  *||||||*|||||*|||||||
targets:101   GUCUCUGCUUCCACUCCCUCA   121

2.5 PREDICTED: Glycine max type II inositol polyphosphate 5-phosphatase 15-like (LOC100801342), mRNA type II inositol polyphosphate 5-phosphatase 15-like(LOC100801342) coding protein psRNATarget