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BaseInfo

ncRNA ID novel_gma_miR4128
Species Glycine max
Class miRNA
Genome position Chr16:25723304-25723374 [+]
Reference genome Glycine_max_v2.0
Source SRR1753107;SRR1295517;SRR1292928;SRR1294476
Length 24
Mature sequence(if miRNA) 1 - GAUCAAGUUGAUUCGUAAAAGGCU - 24
Stem-loop(if miRNA) --      G           A       G     A
  GAUCAA UUGAUUCGUAA AGGCUUA GGAUC A
  |||||| ||||||||||| ||||||| ||||| G
  CUAGUU AACUAGGCGUU UUCGAAU CCUAG U
GC      G           C       A     U
Stem-loop sequence GAUCAAGUUGAUUCGUAAAAGGCUUAGGGAUCAAGUUGAUCCAUAAGCUUCUUGCGGAUCAAGUUGAUCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AF047051.1
ncRNA:24   UCGGAAAAUGCUUAGUUGAACUAG   1
  ***|||||=|||||||||*|||||
targets:246   CUGCUUUUGCGAAUCAACAUGAUC   269

2.5 Glycine max ribosomal protein L41 mRNA, partial cds NA coding protein psRNATarget
AK285974.1
ncRNA:24   UCGGAAAAUGCUUAGUUGAACUAG   1
  ***|*|||=|||||||||*|||||
targets:314   CUGCGUUUGCGAAUCAACAUGAUC   337

2.5 Glycine max cDNA, clone: GMFL01-19-J13 NA coding protein psRNATarget
XM_006574797.2
ncRNA:24   UCGGAAAAUGCUUAGUUGAACUAG   1
  ||==|*||==||||||||||||||
targets:2217   AGUUUCUUGUGAAUCAACUUGAUC   2240

3.0 PREDICTED: Glycine max uncharacterized LOC100791584 (LOC100791584), transcript variant X1, mRNA uncharacterized LOC100791584(LOC100791584) coding protein psRNATarget