ncRNA ID | novel_gma_miR4124 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:31452251-31452306 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753105;SRR2045228;SRR1295521 |
Length | 22 |
Mature sequence(if miRNA) | 35 - AAGGAAAGCAUCAAUGGCGGCU - 56 |
Stem-loop(if miRNA) |
--  A   C   -A          -   G   CC CCA UGG  CUUUCCUUGC UAU G   || ||| |||  |||||||||| |||   GG GGU ACU  GAAAGGAACG AUA U UC  C   A   AC          U   G |
Stem-loop sequence | CCACCACUGGACUUUCCUUGCUAUGGUGAUAUGCAAGGAAAGCAUCAAUGGCGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003551568.3 |
|
2.5 | PREDICTED: Glycine max serine/threonine-protein kinase STN8, chloroplastic-like (LOC100795624), mRNA | serine/threonine-protein kinase STN8, chloroplastic-like(LOC100795624) | coding protein | psRNATarget | |||||||||
XM_003526943.3 |
|
3.0 | PREDICTED: Glycine max cytochrome P450 71A1-like (LOC100792382), mRNA | cytochrome P450 71A1-like(LOC100792382) | coding protein | psRNATarget |