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BaseInfo

ncRNA ID novel_gma_miR4124
Species Glycine max
Class miRNA
Genome position Chr1:31452251-31452306 [+]
Reference genome Glycine_max_v2.0
Source SRR1753105;SRR2045228;SRR1295521
Length 22
Mature sequence(if miRNA) 35 - AAGGAAAGCAUCAAUGGCGGCU - 56
Stem-loop(if miRNA) --  A   C   -A          -   G
  CC CCA UGG  CUUUCCUUGC UAU G
  || ||| |||  |||||||||| |||
  GG GGU ACU  GAAAGGAACG AUA U
UC  C   A   AC          U   G
Stem-loop sequence CCACCACUGGACUUUCCUUGCUAUGGUGAUAUGCAAGGAAAGCAUCAAUGGCGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551568.3
ncRNA:22   UCGGCGGUAACUACGAAAGGAA   1
  *|*||||||||||||*|||||*
targets:509   CGGCGCCAUUGAUGCAUUCCUC   530

2.5 PREDICTED: Glycine max serine/threonine-protein kinase STN8, chloroplastic-like (LOC100795624), mRNA serine/threonine-protein kinase STN8, chloroplastic-like(LOC100795624) coding protein psRNATarget
XM_003526943.3
ncRNA:22   UCGGCGGUAACUACGAAAGGAA   1
  **==||*=||||||||||||||
targets:880   UCUUGCAGUUGAUGCUUUCCUU   901

3.0 PREDICTED: Glycine max cytochrome P450 71A1-like (LOC100792382), mRNA cytochrome P450 71A1-like(LOC100792382) coding protein psRNATarget