Search result

BaseInfo

ncRNA ID novel_gma_miR4117
Species Glycine max
Class miRNA
Genome position Chr7:24450124-24450198 [-]
Reference genome Glycine_max_v2.0
Source SRR1294486
Length 24
Mature sequence(if miRNA) 52 - AUGUGGUACCUGAGCGGCGGGAUC - 75
Stem-loop(if miRNA) --   U    -    A  GG     UC    U G   -  G
  AUG GGUA CCUG GC  CGGGA  CUCG C UCC CU U
  ||| |||| |||| ||  |||||  |||| | ||| ||
  UAC CCAU GGAC CG  GCCCU  GAGU G AGG GA G
CU   -    C    -  -G     --    C G   A  A
Stem-loop sequence AUGUGGUACCUGAGCGGCGGGAUCCUCGUCGUCCCUGUGAAGAGGAGGCUGAGUCCCGGGCCAGGCUACCCAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769576.1
ncRNA:24   CUAGGGCGGCGAGUCCAUGGUGUA   1
  *|||||||=|||||||||||||||
targets:397   AAUCCCGCUGCUCAGGUACCACAU   420

1.0 PREDICTED: Glycine max uncharacterized protein KIAA0754-like (LOC106796664), mRNA uncharacterized protein KIAA0754-like(LOC106796664) coding protein psRNATarget
XM_014772459.1
ncRNA:24   CUAGGGCGGCGAGUCCAUGGUGUA   1
  |=||=|*||||||||||||||||*
targets:1708   GGUCUCACCGCUCAGGUACCACAA   1731

2.0 PREDICTED: Glycine max uncharacterized LOC106797635 (LOC106797635), mRNA uncharacterized LOC106797635(LOC106797635) coding protein psRNATarget