ncRNA ID | novel_gma_miR4116 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:27087303-27087449 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753105 |
Length | 22 |
Mature sequence(if miRNA) | 126 - ACACCAAUCUGUGCUUCUUCCU - 147 |
Stem-loop(if miRNA) |
--A                      G                     C     A          -             CACCAAUCUGUGCUUCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUAUA    |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G    GUGGUUAGGCACGGAGAAGGAG AGAUGGUUGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU GUC                      G                     C     -          A          |
Stem-loop sequence | ACACCAAUCUGUGCUUCUUCCUCGUCUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUAUAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGUUGGUAGAGGAGGAAGAGGCACGGAUUGGUGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014769888.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA | uncharacterized LOC100792447(LOC100792447) | coding protein | psRNATarget |