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BaseInfo

ncRNA ID novel_gma_miR4112
Species Glycine max
Class miRNA
Genome position Chr5:11888258-11888369 [+]
Reference genome Glycine_max_v2.0
Source SRR1753105;SRR1451617
Length 24
Mature sequence(if miRNA) 89 - AUGAAUCAUACGGAUUGAUGAUCC - 112
Stem-loop(if miRNA) --    A                  C                   UU      AAU
  AUCA CAAUUCGUAUGGUUCAUA GGAUUGCCGAUCCGUAUGG  CAUACG   C
  |||| |||||||||||||||||| |||||||||||||||||||  ||||||
  UAGU GUUAGGCAUACUAAGUAU CCUAACGGUUAGGCAUAUU  GUAUGU   A
CC    A                  A                   UG      CUA
Stem-loop sequence AUCAACAAUUCGUAUGGUUCAUACGGAUUGCCGAUCCGUAUGGUUCAUACGAAUCAAUCUGUAUGGUUUAUACGGAUUGGCAAUCCAUAUGAAUCAUACGGAUUGAUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598935.2
ncRNA:24   CCUAGUAGUUAGGCAUACUAAGUA   1
  ***|||||=||||*||||||||||
targets:1928   AUUUCAUCGAUCCAUAUGAUUCAU   1951

2.5 PREDICTED: Glycine max sialyltransferase-like protein 1 (LOC100800355), transcript variant X1, mRNA sialyltransferase-like protein 1(LOC100800355) coding protein psRNATarget