ncRNA ID | novel_gma_miR4112 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:11888258-11888369 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753105;SRR1451617 |
Length | 24 |
Mature sequence(if miRNA) | 89 - AUGAAUCAUACGGAUUGAUGAUCC - 112 |
Stem-loop(if miRNA) |
--    A                  C                   UU      AAU   AUCA CAAUUCGUAUGGUUCAUA GGAUUGCCGAUCCGUAUGG  CAUACG   C   |||| |||||||||||||||||| |||||||||||||||||||  ||||||   UAGU GUUAGGCAUACUAAGUAU CCUAACGGUUAGGCAUAUU  GUAUGU   A CC    A                  A                   UG      CUA |
Stem-loop sequence | AUCAACAAUUCGUAUGGUUCAUACGGAUUGCCGAUCCGUAUGGUUCAUACGAAUCAAUCUGUAUGGUUUAUACGGAUUGGCAAUCCAUAUGAAUCAUACGGAUUGAUGAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006598935.2 |
|
2.5 | PREDICTED: Glycine max sialyltransferase-like protein 1 (LOC100800355), transcript variant X1, mRNA | sialyltransferase-like protein 1(LOC100800355) | coding protein | psRNATarget |