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BaseInfo

ncRNA ID	novel_gma_miR4108
Species	Glycine max
Class	miRNA
Genome position	Chr3:71359-71481 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1753105
Length	24
Mature sequence(if miRNA)	1 - CGGAUCAAGUUGAUCUGUAAGCCU - 24
Stem-loop(if miRNA)	--C                         UC             C       A      GAU    UUUAUGGAUCAACUUGAUCUGUAAG  UUUUACGGAUCAA UUGAUCC UAUGUU   A    |||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||   U    GAAUGUCUAGUUGAACUAGGCAUUC  AAAAUGCCUAGUU AACUAGG AUACGA   U UCC                         CU             C       C      AUU
Stem-loop sequence	CUUUAUGGAUCAACUUGAUCUGUAAGUCUUUUACGGAUCAACUUGAUCCAUAUGUUGAUAUUUUAAGCAUACGGAUCAACUUGAUCCGUAAAAUCCUUACGGAUCAAGUUGAUCUGUAAGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600975.2	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ||*|||||=||||||||||||||| targets:1247   AGCCUUACGGAUCAACUUGAUCCG   1270 Target Full Sequence	1.0	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_006600975.2	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   |*||*|||||||=||||||||||| targets:1219   AAGCAUACAGAUUAACUUGAUCCG   1242 Target Full Sequence	1.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_003547498.3	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ***||||==||||||||||||||| targets:452   CAACUUAUGGAUCAACUUGAUCCG   475 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_003547498.3	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   |*||*|||=||||||||||||||* targets:409   AAGCAUACGGAUCAACUUGAUCCA   432 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ***||||==||||||||||||||| targets:1047   CAACUUAUGGAUCAACUUGAUCCG   1070 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   |*||*|||=||||||||||||||* targets:1004   AAGCAUACGGAUCAACUUGAUCCA   1027 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_003547498.3	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   =**|*|=||||||||*|||||||| targets:83   GUACAUGCAGAUCAAAUUGAUCCG   106 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   |**=||||=|||||||||||||=| targets:507   AUCUUUACGGAUCAACUUGAUCUG   530 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   =**|*|=||||||||*|||||||| targets:678   GUACAUGCAGAUCAAAUUGAUCCG   701 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006583803.2	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ****|||||||||*|||||||||* targets:1478   CAAAUUACAGAUCUACUUGAUCCC   1501 Target Full Sequence	2.5	PREDICTED: Glycine max phragmoplast orienting kinesin 2 (LOC100795729), transcript variant X2, mRNA	phragmoplast orienting kinesin 2(LOC100795729)	coding protein	psRNATarget
XM_006583802.2	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ****|||||||||*|||||||||* targets:1478   CAAAUUACAGAUCUACUUGAUCCC   1501 Target Full Sequence	2.5	PREDICTED: Glycine max phragmoplast orienting kinesin 2 (LOC100795729), transcript variant X1, mRNA	phragmoplast orienting kinesin 2(LOC100795729)	coding protein	psRNATarget
XM_014771559.1	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   ****|||||||||*|||||||||* targets:1300   CAAAUUACAGAUCUACUUGAUCCC   1323 Target Full Sequence	2.5	PREDICTED: Glycine max phragmoplast orienting kinesin 2-like (LOC100809655), mRNA	phragmoplast orienting kinesin 2-like(LOC100809655)	coding protein	psRNATarget
XM_003524153.3	ncRNA:24   UCCGAAUGUCUAGUUGAACUAGGC   1   |**|*|||=||||||*|||||||| targets:229   AAACAUACGGAUCAAGUUGAUCCG   252 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA	uncharacterized LOC100805437(LOC100805437)	coding protein	psRNATarget