ncRNA ID | novel_gma_miR4105 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:30177370-30177442 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753105 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCACACAGAUUGUUGAUCCGUAUG - 24 |
Stem-loop(if miRNA) |
--       UG         A              U   UACGGAU  ACAAUUUGU UGAGCCAUACGGAU A   |||||||  ||||||||| |||||||||||||| A   AUGCCUA  UGUUAGACA ACUUGGUAUGCCUA U GU       GU         C              U |
Stem-loop sequence | UACGGAUUGACAAUUUGUAUGAGCCAUACGGAUUAAUUAUCCGUAUGGUUCACACAGAUUGUUGAUCCGUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AF529302.2 |
|
3.0 | Glycine max polygalacturonase inhibitor protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001250937.2 |
|
3.0 | Glycine max polygalacturonase inhibitor protein (PGIP4), mRNA | polygalacturonase inhibitor protein(LOC548041) | coding protein | psRNATarget |