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BaseInfo

ncRNA ID	novel_gma_miR4104
Species	Glycine max
Class	miRNA
Genome position	Chr3:34266853-34267062 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1753105;SRR1753107;SRR1295522
Length	22
Mature sequence(if miRNA)	1 - CCACAAUUGGACGUUGACCAUU - 22
Stem-loop(if miRNA)	--C  C      A        A                          G   C         A                       -AAA AUGAAAUGCAUUGU    CA AAUUGG CGUUGACC UUAGCAAGUAAUGUUGAUUGUCAUGU UCA GUUCUUAUU GAUGAUGACUGUCACGUGUCAUG    G              U    || |||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    |              G    GU UUAACC GCAACUGG AAUCGUUCAUUACAACUGACAGUACA AGU CAAGAAUAA CUAUUAUUGAUAGUGCACAGUAC    C              U ACA  A      C        C                          A   A         C                       AAGA CAAUUAGUUACUUU
Stem-loop sequence	CCACAAUUGGACGUUGACCAUUAGCAAGUAAUGUUGAUUGUCAUGUGUCACGUUCUUAUUAGAUGAUGACUGUCACGUGUCAUGAAAGAUGAAAUGCAUUGUUGUUUUCAUUGAUUAACCAGAACAUGACACGUGAUAGUUAUUAUCCAAUAAGAACAUGAAACAUGACAGUCAACAUUACUUGCUAACGGUCAACGCCCAAUUAUGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006602607.2	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   ||*||||||||||||||||||* targets:708   AACGGUCAACGUCCAAUUGUGA   729 Target Full Sequence	1.0	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
HI410445.1	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   ||*|||||||*||||||||||| targets:218   AACGGUCAACAUCCAAUUGUGG   239 Target Full Sequence	1.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   ||*|||||||*||||||||||| targets:218   AACGGUCAACAUCCAAUUGUGG   239 Target Full Sequence	1.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
JB170906.1	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   ||*|||||||*||||||||||| targets:218   AACGGUCAACAUCCAAUUGUGG   239 Target Full Sequence	1.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
XM_006577849.2	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   *|**|||||*|||||||||||| targets:2059   CACUGUCAAAGUCCAAUUGUGG   2080 Target Full Sequence	2.5	PREDICTED: Glycine max BEL1-like homeodomain protein 6 (LOC100801522), transcript variant X2, mRNA	BEL1-like homeodomain protein 6(LOC100801522)	coding protein	psRNATarget
XM_006577847.2	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   *|**|||||*|||||||||||| targets:2141   CACUGUCAAAGUCCAAUUGUGG   2162 Target Full Sequence	2.5	PREDICTED: Glycine max BEL1-like homeodomain protein 6 (LOC100801522), transcript variant X1, mRNA	BEL1-like homeodomain protein 6(LOC100801522)	coding protein	psRNATarget
XM_006577848.2	ncRNA:22   UUACCAGUUGCAGGUUAACACC   1   *|**|||||*|||||||||||| targets:2169   CACUGUCAAAGUCCAAUUGUGG   2190 Target Full Sequence	2.5	PREDICTED: Glycine max BEL1-like homeodomain protein 6 (LOC100801522), transcript variant X3, mRNA	BEL1-like homeodomain protein 6(LOC100801522)	coding protein	psRNATarget