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BaseInfo

ncRNA ID novel_gma_miR4094
Species Glycine max
Class miRNA
Genome position Chr6:1778399-1778478 [-]
Reference genome Glycine_max_v2.0
Source SRR1294486
Length 24
Mature sequence(if miRNA) 1 - UCUUUUUAAAAGUUUGGUCUGGCC - 24
Stem-loop(if miRNA) --          -        -------   CUGAGCCUAGCCU
  CCAGACCAGG UUUUGAAA       GGC             A
  |||||||||| ||||||||       |||
  GGUCUGGUUU AAAAUUUU       CGG             C
CC          G        UCUAGUC   AGUUUCUAAGUAG
Stem-loop sequence CCAGACCAGGUUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAUCUUUUUAAAAGUUUGGUCUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526283.3
ncRNA:24   CCGGUCUGGUUUGAAAAUUUUUCU   1
  ||=|||||=|=||||||||||||=
targets:239   GGUCAGACUAGACUUUUAAAAAGG   262

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792539), mRNA UPF0481 protein At3g47200-like(LOC100792539) coding protein psRNATarget