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BaseInfo

ncRNA ID novel_gma_miR4088
Species Glycine max
Class miRNA
Genome position Chr10:4752243-4752330 [-]
Reference genome Glycine_max_v2.0
Source SRR1753105
Length 24
Mature sequence(if miRNA) 65 - UUUGUCAUCAUGACCGUUGUCGCC - 88
Stem-loop(if miRNA) --U       C    C      C C     AUGC         CA
   UUGUCAU AUGA CGUUGU G CGUUG    UGUCACCAC  C
   ||||||| |||| |||||| | |||||    |||||||||  C
   AGCAGUG UAUU GUAACA C GCAGU    ACAGUGGUG  G
GAU       A    A      A A     ---A         CU
Stem-loop sequence UUUGUCAUCAUGACCGUUGUCGCCGUUGAUGCUGUCACCACCACCGUCGUGGUGACAAUGACGACAACAAUGAUUAUAGUGACGAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006606247.2
ncRNA:24   CCGCUGUUGCCAGUACUACUGUUU   1
  *||*||||||||*||||||||||*
targets:572   UGCAACAACGGUGAUGAUGACAAC   595

2.5 PREDICTED: Glycine max zinc finger protein ZAT5-like (LOC100799383), mRNA zinc finger protein ZAT5-like(LOC100799383) coding protein psRNATarget