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BaseInfo

ncRNA ID	novel_gma_miR4082
Species	Glycine max
Class	miRNA
Genome position	Chr13:44790992-44791131 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1753104
Length	20
Mature sequence(if miRNA)	1 - CAUUUUUAGUCCUUGUAAGC - 20
Stem-loop(if miRNA)	--               U   C          C    U              --CACGAACUUA    GAC   CAUUUUUAGUCCUUG AAG UUGUGUUUUU UAAU UUGGUCCCUAUAAG            UAGG   U   ||||||||||||||| ||| |||||||||| |||| ||||||||||||||            ||||   GUAAAAAUCAGGGAC UUC AACGUAAAAA GUUA AACCAGGGAUAUUC            AUUC   A GG               U   A          A    U              UAAGAUUAAAAA    AAU
Stem-loop sequence	CAUUUUUAGUCCUUGUAAGCUUGUGUUUUUCUAAUUUUGGUCCCUAUAAGCACGAACUUAUAGGGACUAUAACUUAAAAAAUUAGAAUCUUAUAGGGACCAAUAUUGAAAAAAUGCAAACUUUCAGGGACUAAAAAUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006587058.2	ncRNA:20   CGAAUGUUCCUGAUUUUUAC   1   *=|||*|||||||||||||* targets:2273   UUUUAAAAGGACUAAAAAUA   2292 Target Full Sequence	3.0	PREDICTED: Glycine max CTD small phosphatase-like protein 2 (LOC100786602), transcript variant X5, mRNA	CTD small phosphatase-like protein 2(LOC100786602)	coding protein	psRNATarget
XM_014762031.1	ncRNA:20   CGAAUGUUCCUGAUUUUUAC   1   *=|||*|||||||||||||* targets:2330   UUUUAAAAGGACUAAAAAUA   2349 Target Full Sequence	3.0	PREDICTED: Glycine max CTD small phosphatase-like protein 2 (LOC100786602), transcript variant X3, mRNA	CTD small phosphatase-like protein 2(LOC100786602)	coding protein	psRNATarget
XM_003533798.3	ncRNA:20   CGAAUGUUCCUGAUUUUUAC   1   *=|||*|||||||||||||* targets:5941   UUUUAAAAGGACUAAAAAUA   5960 Target Full Sequence	3.0	PREDICTED: Glycine max CTD small phosphatase-like protein 2 (LOC100786602), transcript variant X1, mRNA	CTD small phosphatase-like protein 2(LOC100786602)	coding protein	psRNATarget