ncRNA ID | novel_gma_miR4060 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:30394429-30394494 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753104 |
Length | 21 |
Mature sequence(if miRNA) | 46 - UACAUGCGGAUCAAGUUGAUC - 66 |
Stem-loop(if miRNA) |
--               -------A  GGCAACUUG   UCAACUUGAUCUGUA        AA         A   |||||||||||||||        ||         U   AGUUGAACUAGGCGU        AG         C CU               ACAUAUAA  UAACGGAGU |
Stem-loop sequence | UCAACUUGAUCUGUAAAAGGCAACUUGAUCUGAGGCAAUGAAAUAUACAUGCGGAUCAAGUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |