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BaseInfo

ncRNA ID novel_gma_miR4060
Species Glycine max
Class miRNA
Genome position Chr4:30394429-30394494 [+]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 21
Mature sequence(if miRNA) 46 - UACAUGCGGAUCAAGUUGAUC - 66
Stem-loop(if miRNA) --               -------A  GGCAACUUG
  UCAACUUGAUCUGUA        AA         A
  |||||||||||||||        ||         U
  AGUUGAACUAGGCGU        AG         C
CU               ACAUAUAA  UAACGGAGU
Stem-loop sequence UCAACUUGAUCUGUAAAAGGCAACUUGAUCUGAGGCAAUGAAAUAUACAUGCGGAUCAAGUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:21   CUAGUUGAACUAGGCGUACAU   1
  |||||||||||||=|||||||
targets:516   GAUCAACUUGAUCUGCAUGUA   536

1.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget