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BaseInfo

ncRNA ID novel_gma_miR4058
Species Glycine max
Class miRNA
Genome position Chr3:18430325-18430471 [+]
Reference genome Glycine_max_v2.0
Source SRR1753104;SRR1295519
Length 24
Mature sequence(if miRNA) 1 - ACCGUCUUUGAAUGUUGAACCAGA - 24
Stem-loop(if miRNA) --            U   -   CCA ACACCGCAUUCAAAGAUGGUUAUUACGUAAUAAGCGUCUUUGAAUGUU
  ACCGUCUUUGAA GUU GAA   G                                                G
  |||||||||||| ||| |||   |                                                A
  UGGCAGAAACUU CAA CUU   U                                                A
AU            U   U   -AU AAGUUUCUACCAAUAAUGCAUUAUUGGCAGAAACUUACGUCACAGACC
Stem-loop sequence ACCGUCUUUGAAUGUUGAACCAGACACCGCAUUCAAAGAUGGUUAUUACGUAAUAAGCGUCUUUGAAUGUUGAACCAGACACUGCAUUCAAAGACGGUUAUUACGUAAUAACCAUCUUUGAAUUAUUCUAACUUUCAAAGACGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   AGACCAAGUUGUAAGUUUCUGCCA   1
  ***|***|||||||||||||||||
targets:1534   GAAGAAGCAACAUUCAAAGACGGU   1557

2.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   AGACCAAGUUGUAAGUUUCUGCCA   1
  ***|***=||||||||||||||||
targets:1479   GAAGACAUAACAUUCAAAGACGGU   1502

3.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget