ncRNA ID | novel_gma_miR4058 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:18430325-18430471 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753104;SRR1295519 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCGUCUUUGAAUGUUGAACCAGA - 24 |
Stem-loop(if miRNA) |
--            U   -   CCA ACACCGCAUUCAAAGAUGGUUAUUACGUAAUAAGCGUCUUUGAAUGUU   ACCGUCUUUGAA GUU GAA   G                                                G   |||||||||||| ||| |||   |                                                A   UGGCAGAAACUU CAA CUU   U                                                A AU            U   U   -AU AAGUUUCUACCAAUAAUGCAUUAUUGGCAGAAACUUACGUCACAGACC |
Stem-loop sequence | ACCGUCUUUGAAUGUUGAACCAGACACCGCAUUCAAAGAUGGUUAUUACGUAAUAAGCGUCUUUGAAUGUUGAACCAGACACUGCAUUCAAAGACGGUUAUUACGUAAUAACCAUCUUUGAAUUAUUCUAACUUUCAAAGACGGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
2.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
3.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |