ncRNA ID | novel_gma_miR4056 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:45343736-45343818 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1753104;SRR3160568;SRR1451604;SRR1451608;SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCUUGACUUUGGACUUUUGGGU - 22 |
Stem-loop(if miRNA) |
--     -        A                    C   U   CCGAA GUCCAAAG CAAGAAAUUAUCUACCAGCA UGA U   ||||| |||||||| |||||||||||||||||||| |||   GGUUU CAGGUUUC GUUCUUUAAUAGGUGGUCGU ACU G UG     U        A                    U   A |
Stem-loop sequence | CCGAAGUCCAAAGACAAGAAAUUAUCUACCAGCACUGAUUGAUCAUUGCUGGUGGAUAAUUUCUUGACUUUGGACUUUUGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576238.2 |
|
2.5 | PREDICTED: Glycine max lipase 1-like (LOC100775258), transcript variant X2, mRNA | lipase 1-like(LOC100775258) | coding protein | psRNATarget | |||||||||
XM_006576237.2 |
|
2.5 | PREDICTED: Glycine max lipase 1-like (LOC100775258), transcript variant X1, mRNA | lipase 1-like(LOC100775258) | coding protein | psRNATarget |