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BaseInfo

ncRNA ID novel_gma_miR4055
Species Glycine max
Class miRNA
Genome position Chr2:21699643-21699730 [+]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 20
Mature sequence(if miRNA) 69 - UUCUAAGAUGAUUUUGACAU - 88
Stem-loop(if miRNA) --  A            -     AAC    U   A A A      A
  GU AAAAUCGUCUUA AAUGU   CCAU UUA G C GUUUUG A
  || |||||||||||| |||||   |||| ||| | | ||||||
  CA UUUUAGUAGAAU UUACA   GGUG AAU C G CAAAAU G
UA  G            C     --C    U   - A C      U
Stem-loop sequence GUAAAAAUCGUCUUAAAUGUAACCCAUUUUAAGACAGUUUUGAAGUUAAAACCGACUAAUGUGGCACAUUCUAAGAUGAUUUUGACAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593460.2
ncRNA:20   UACAGUUUUAGUAGAAUCUU   1
  |*|||||||||||||*||||
targets:1918   AGGUCAAAAUCAUCUCAGAA   1937

2.5 PREDICTED: Glycine max cadmium/zinc-transporting ATPase HMA3-like (LOC100817567), mRNA cadmium/zinc-transporting ATPase HMA3-like(LOC100817567) coding protein psRNATarget