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BaseInfo

ncRNA ID novel_gma_miR4052
Species Glycine max
Class miRNA
Genome position Chr20:32467399-32467446 [-]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 23
Mature sequence(if miRNA) 1 - UUUUCUAAGACAGUUAUUUGCCU - 23
Stem-loop(if miRNA) ---UUAAA             UGA
        AACUGUCUUAGAA   U
        |||||||||||||   A
        UUGACAGAAUCUU   G
UCCGUUUA             UUU
Stem-loop sequence UUAAAAACUGUCUUAGAAUGAUAGUUUUUCUAAGACAGUUAUUUGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778927.1
ncRNA:23   UCCGUUUAUUGACAGAAUCUUUU   1
  ||--||||||=|||||||||||=
targets:269   AG--AAAUAAUUGUCUUAGAAAG   289

2.5 PREDICTED: Glycine max uncharacterized LOC100776631 (LOC100776631), transcript variant X3, mRNA uncharacterized LOC100776631(LOC100776631) coding protein psRNATarget
XM_014778928.1
ncRNA:23   UCCGUUUAUUGACAGAAUCUUUU   1
  ||--||||||=|||||||||||=
targets:269   AG--AAAUAAUUGUCUUAGAAAG   289

2.5 PREDICTED: Glycine max uncharacterized LOC100776631 (LOC100776631), transcript variant X4, mRNA uncharacterized LOC100776631(LOC100776631) coding protein psRNATarget