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BaseInfo

ncRNA ID novel_gma_miR4051
Species Glycine max
Class miRNA
Genome position Chr20:41922552-41922609 [+]
Reference genome Glycine_max_v2.0
Source SRR1753104;SRR1451624
Length 21
Mature sequence(if miRNA) 1 - UUUGUAAUUUUGGAUUGAGUA - 21
Stem-loop(if miRNA) --  UG                A     G
  UU  UAAUUUUGGAUUGAGU AUCCA A
  ||  |||||||||||||||| |||||
  AA  AUUAAGAUCUAACUCA UAGGU A
UA  GU                C     C
Stem-loop sequence UUUGUAAUUUUGGAUUGAGUAAUCCAGAACUGGAUCACUCAAUCUAGAAUUAUGAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT092066.1
ncRNA:21   AUGAGUUAGGUUUUAAUGUUU   1
  *|=||||||||||||*|||||
targets:39   CAUUCAAUCCAAAAUGACAAA   59

2.5 Soybean clone JCVI-FLGm-9D19 unknown mRNA NA coding protein psRNATarget
NM_001249907.2
ncRNA:21   AUGAGUUAGGUUUUAAUGUUU   1
  *|=||||||||||||*|||||
targets:1194   CAUUCAAUCCAAAAUGACAAA   1214

2.5 Glycine max RecF/RecN/SMC N terminal domain-containing protein (LOC100527238), mRNA uncharacterized LOC100527238(LOC100527238) coding protein psRNATarget