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BaseInfo

ncRNA ID novel_gma_miR4048
Species Glycine max
Class miRNA
Genome position Chr3:22957263-22957337 [+]
Reference genome Glycine_max_v2.0
Source SRR1294486
Length 24
Mature sequence(if miRNA) 1 - AUGUGGUACCUGAGCGGCGGGAUC - 24
Stem-loop(if miRNA) --   U    -    A  G C     ----    G  G  A
  AUG GGUA CCUG GC G GGGAU    CCUC UC UU C
  ||| |||| |||| || | |||||    |||| || || U
  UAC CCAU GGAC CG U CCCUG    GGAG AG AG G
CU   -    C    -  G -     AAUC    G  G  U
Stem-loop sequence AUGUGGUACCUGAGCGGCGGGAUCCUCGUCGUUACUGUGAGGAGGAGGCUAAGUCCCUGGCCAGGCUACCCAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769576.1
ncRNA:24   CUAGGGCGGCGAGUCCAUGGUGUA   1
  *|||||||=|||||||||||||||
targets:397   AAUCCCGCUGCUCAGGUACCACAU   420

1.0 PREDICTED: Glycine max uncharacterized protein KIAA0754-like (LOC106796664), mRNA uncharacterized protein KIAA0754-like(LOC106796664) coding protein psRNATarget
XM_014772459.1
ncRNA:24   CUAGGGCGGCGAGUCCAUGGUGUA   1
  |=||=|*||||||||||||||||*
targets:1708   GGUCUCACCGCUCAGGUACCACAA   1731

2.0 PREDICTED: Glycine max uncharacterized LOC106797635 (LOC106797635), mRNA uncharacterized LOC106797635(LOC106797635) coding protein psRNATarget