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BaseInfo

ncRNA ID novel_gma_miR4042
Species Glycine max
Class miRNA
Genome position Chr3:22527447-22527501 [+]
Reference genome Glycine_max_v2.0
Source SRR1294486
Length 24
Mature sequence(if miRNA) 32 - AAGGAUGAACGCAAGCAGGGAUGG - 55
Stem-loop(if miRNA) --AUA    G    --     A    CAG
     UCUG UUGU  UUAUU CUUG   A
     |||| ||||  ||||| ||||
     GGAC AACG  AGUAG GAAU   U
GGUAG    G    CA     -    UCA
Stem-loop sequence AUAUCUGGUUGUUUAUUACUUGCAGAUACUUAAGGAUGAACGCAAGCAGGGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006606859.2
ncRNA:24   GGUAGGGACGAACGCAAGUAGGAA   1
  |||-||=||||||||||*||||||
targets:745   CCA-CCUUGCUUGCGUUGAUCCUU   767

2.5 PREDICTED: Glycine max RING-H2 finger protein ATL70-like (LOC102663718), mRNA RING-H2 finger protein ATL70-like(LOC102663718) coding protein psRNATarget