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BaseInfo

ncRNA ID	novel_gma_miR4041
Species	Glycine max
Class	miRNA
Genome position	Chr17:18837399-18837444 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1753104
Length	22
Mature sequence(if miRNA)	1 - UAUGCAAGGAAAGCAUCAAUGG - 22
Stem-loop(if miRNA)	----ACUG A          -   G         G CUUUCCUUGC UAU G         | |||||||||| |||         C GAAAGGAACG AUA U GGUAACUA -          U   G
Stem-loop sequence	ACUGGACUUUCCUUGCUAUGGUGAUAUGCAAGGAAAGCAUCAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762407.1	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3001   CAAUGGAUGCUUUCCUUGUAUA   3022 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100805894), transcript variant X2, mRNA	ATP-dependent helicase BRM-like(LOC100805894)	coding protein	psRNATarget
XM_003552354.3	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3322   CAAUGGAUGCUUUCCUUGUAUA   3343 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X5, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_014770814.1	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3016   CAAUGGAUGCUUUCCUUGUAUA   3037 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X6, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_014770813.1	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3399   CAAUGGAUGCUUUCCUUGUAUA   3420 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X4, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_006602745.2	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3431   CAAUGGAUGCUUUCCUUGUAUA   3452 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X2, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_006602746.2	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3437   CAAUGGAUGCUUUCCUUGUAUA   3458 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X3, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_003534506.3	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3432   CAAUGGAUGCUUUCCUUGUAUA   3453 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100805894), transcript variant X1, mRNA	ATP-dependent helicase BRM-like(LOC100805894)	coding protein	psRNATarget
XM_006602744.2	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   |*||*|||||||||||||=||| targets:3447   CAAUGGAUGCUUUCCUUGUAUA   3468 Target Full Sequence	2.5	PREDICTED: Glycine max ATP-dependent helicase BRM-like (LOC100811608), transcript variant X1, mRNA	ATP-dependent helicase BRM-like(LOC100811608)	coding protein	psRNATarget
XM_014763222.1	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   *||||||*|||||*|||||||| targets:4886   ACAUUGAGGCUUUACUUGCAUA   4907 Target Full Sequence	2.5	PREDICTED: Glycine max protein CHROMATIN REMODELING 20-like (LOC100794911), mRNA	protein CHROMATIN REMODELING 20-like(LOC100794911)	coding protein	psRNATarget
XM_003535185.3	ncRNA:22   GGUAACUACGAAAGGAACGUAU   1   *=*|||||*||||=|||||||| targets:1224   AUUUUGAUACUUUUCUUGCAUA   1245 Target Full Sequence	2.5	PREDICTED: Glycine max probable 2-oxoglutarate/Fe(II)-dependent dioxygenase (LOC100805175), mRNA	probable 2-oxoglutarate/Fe(II)-dependent dioxygenase(LOC100805175)	coding protein	psRNATarget