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BaseInfo

ncRNA ID novel_gma_miR4040
Species Glycine max
Class miRNA
Genome position Chr17:21203179-21203345 [-]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 21
Mature sequence(if miRNA) 1 - UAUAGGAGUAGUGUUCAAACU - 21
Stem-loop(if miRNA) --              U   GA   --A     ------    -         G     UG    U   G  G AAG   CGUGGAUGAG
  UUUGAACACUAUUU CUG  AGC   CAUCA      GUCU GAUAUUUUA UUGAA  AUAC GUA CA U   UCU          A
  |||||||||||||| |||  |||   |||||      |||| ||||||||| |||||  |||| ||| || |   |||          A
  AAACUUGUGAUGAG GAU  UCG   GUAGU      CGGA UUAUAAAAU AACUU  UAUG CAU GU G   UUG          A
UC              -   -A   GUG     AUAAUA    G         A     GU    -   -  G -AA   GAAUGACGGG
Stem-loop sequence UUUGAACACUAUUUUCUGGAAGCACAUCAGUCUGAUAUUUUAGUUGAAUGAUACUGUAGCAGUAAGUCUCGUGGAUGAGAAAGGGCAGUAAGGUUAAGGUGUACGUAUUGUUCAAAUAAAAUAUUGAGGCAUAAUAUGAUGGUGGCUAUAGGAGUAGUGUUCAAACU