Search result

BaseInfo

ncRNA ID novel_gma_miR4036
Species Glycine max
Class miRNA
Genome position Chr16:6310783-6310891 [-]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 24
Mature sequence(if miRNA) 1 - UUAUUUAAUUGACGAUAAGGACCU - 24
Stem-loop(if miRNA) --   UC                                C A  --AA  GA  U
  GUC  UGUCGUCAGUUAAGUGAUGAUAUGACAUUAUC C AU    CU  UA A
  |||  |||||||||||||||||||||||||||||||| | ||    ||  || U
  CAG  AUAGCAGUUAAUUUAUUACUAUACUGUAAUAG G UG    GA  AU A
UC   GA                                A A  GAAA  AA  U
Stem-loop sequence GUCUCUGUCGUCAGUUAAGUGAUGAUAUGACAUUAUCCCAAUAACUGAUAUAUAUUAAAAGAAAGGUAGAGAUAAUGUCAUAUCAUUAUUUAAUUGACGAUAAGGACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603429.1
ncRNA:24   UCCAGGAAUAGCAGUUAAUUUAUU   1
  *|****||||||||||||||||||
targets:1407   UGUAGAUUAUCGUCAAUUAAAUAA   1430

1.0 PREDICTED: Glycine max uncharacterized LOC102661104 (LOC102661104), mRNA uncharacterized LOC102661104(LOC102661104) coding protein psRNATarget