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BaseInfo

ncRNA ID novel_gma_miR4035
Species Glycine max
Class miRNA
Genome position Chr16:33264068-33264125 [-]
Reference genome Glycine_max_v2.0
Source SRR1753104;SRR1753105;SRR1451607;SRR1451611
Length 24
Mature sequence(if miRNA) 35 - GUUUUUGUUUUCCUAGAACUGCCU - 58
Stem-loop(if miRNA) --G       -         ACU      C
   UUUUUGU UUUCCUAGA   GCCUUU C
   ||||||| |||||||||   ||||||
   AAAAACA AAAGGAUCU   UGGAAA A
UAA       U         -AC      A
Stem-loop sequence GUUUUUGUUUUCCUAGAACUGCCUUUCCAAAAAGGUCAUCUAGGAAAUACAAAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001249833.2
ncRNA:24   UCCGUCAAGAUCCUUUUGUUUUUG   1
  |*|*|||||*||||||||||=|||
targets:195   AAGAAGUUCGAGGAAAACAAGAAC   218

2.5 Glycine max uncharacterized LOC100305793 (LOC100305793), mRNA uncharacterized LOC100305793(LOC100305793) coding protein psRNATarget
BT089572.1
ncRNA:24   UCCGUCAAGAUCCUUUUGUUUUUG   1
  |*|*|||||*||||||||||=|||
targets:195   AAGAAGUUCGAGGAAAACAAGAAC   218

2.5 Soybean clone JCVI-FLGm-2E18 unknown mRNA NA coding protein psRNATarget