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BaseInfo

ncRNA ID novel_gma_miR4033
Species Glycine max
Class miRNA
Genome position Chr16:15825695-15825755 [+]
Reference genome Glycine_max_v2.0
Source SRR1753104
Length 23
Mature sequence(if miRNA) 1 - UGACUUACGGAUCAAGUUGAUCC - 23
Stem-loop(if miRNA) --UG             G        U   
    ACUUACGGAUCAA UUGAUCCG AAGU
    ||||||||||||| |||||||| |||G
    UGAAUGCCUAGUU AACUAGGC UUCA
UCAG             G        C   
Stem-loop sequence UGACUUACGGAUCAAGUUGAUCCGUAAGUGACUUCCGGAUCAAGUUGAUCCGUAAGUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:23   CCUAGUUGAACUAGGCAUUCAGU   1
  ||||||||||||||||||||||*
targets:460   GGAUCAACUUGAUCCGUAAGUCU   482

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:23   CCUAGUUGAACUAGGCAUUCAGU   1
  ||||||||||||||||||||||*
targets:1055   GGAUCAACUUGAUCCGUAAGUCU   1077

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget