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BaseInfo

ncRNA ID novel_gma_miR4025
Species Glycine max
Class miRNA
Genome position Chr1:53866296-53866370 [-]
Reference genome Glycine_max_v2.0
Source SRR1451681
Length 20
Mature sequence(if miRNA) 56 - AUUAAGUUAUUGUUCUAUGU - 75
Stem-loop(if miRNA) --        AUUG      -----       AAU   UU
  AUUAAGUU    UUCUAU     GUGGUUC   AUG  G
  ||||||||    ||||||     |||||||   |||
  UAAUUCGA    AGGAUG     UAUUAAG   UAU  U
AU        ACGA      UAUUU       GUU   UC
Stem-loop sequence AUUAAGUUAUUGUUCUAUGUGGUUCAAUAUGUUGUCUUAUUUGGAAUUAUUUUAUGUAGGAAGCAAGCUUAAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003522347.3
ncRNA:20   UGUAUCUUGUUAUUGAAUUA   1
  *||||*|||||*||||||||
targets:33   CCAUAAAACAACAACUUAAU   52

2.5 PREDICTED: Glycine max transcription initiation factor TFIID subunit 5-like (LOC100805953), mRNA transcription initiation factor TFIID subunit 5-like(LOC100805953) coding protein psRNATarget