Search result

BaseInfo

ncRNA ID	novel_gma_miR4020
Species	Glycine max
Class	miRNA
Genome position	Chr10:41700670-41700739 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451681
Length	21
Mature sequence(if miRNA)	50 - ACAGUCCAUCUUGGCAAAGCU - 70
Stem-loop(if miRNA)	--AC       CU     ----      ---AAA    U     AGUCCAU  UGGCA    AAGCUA      ACUC C     |||||||  |||||    ||||||      |||| A     UCAGGUA  AUCGU    UUCGAU      UGGG A ACAC       --     AAGU      CGGUAA    U
Stem-loop sequence	ACAGUCCAUCUUGGCAAAGCUAAAAACUCUCAAUGGGUAAUGGCUAGCUUUGAAUGCUAAUGGACUCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092794.1	ncRNA:21   UCGAAACGGUUCUACCUGACA   1   **|||||||||||*||||||* targets:124   CCCUUUGCCAAGAAGGACUGG   144 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-11D2 unknown mRNA	NA	coding protein	psRNATarget
NM_001254076.2	ncRNA:21   UCGAAACGGUUCUACCUGACA   1   **|||||||||||*||||||* targets:126   CCCUUUGCCAAGAAGGACUGG   146 Target Full Sequence	2.5	Glycine max 40S ribosomal protein S3a-like (LOC100805519), mRNA	40S ribosomal protein S3a-like(LOC100805519)	coding protein	psRNATarget
BT098700.1	ncRNA:21   UCGAAACGGUUCUACCUGACA   1   **|||||||||||*||||||* targets:128   CCCUUUGCCAAGAAGGACUGG   148 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-23I10 unknown mRNA	NA	coding protein	psRNATarget
BT093927.1	ncRNA:21   UCGAAACGGUUCUACCUGACA   1   **|||||||||||*||||||* targets:205   CCCUUUGCCAAGAAGGACUGG   225 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-17N24 unknown mRNA	NA	coding protein	psRNATarget